123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: MZ636519
    Parameters: 2 7 7 80 10 50 500
    Length:  448694

    Tables:   1   

    This is table  1  of  1  ( 19 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  136--201                          30       2.2      30          86        8         89      27   13   34   24   1.93

  44024--44054                      14       2.2      14          94        0         53      38   9    12   38   1.77

  44639--44689                      22       2.4      22          83        3         59      31   39   21   7    1.82

  57834--57860                      13       2.1      13          100       0         54      40   14   14   29   1.86

  117710--117738                    14       2.1      14          100       0         58      37   20   13   27   1.91

  125058--125111                    28       1.9      28          88        0         81      25   14   25   33   1.95

  125784--125815                    15       2.1      15          100       0         64      31   9    25   34   1.87

  126297--126326                    15       2.0      15          93        0         51      50   16   6    26   1.70

  201082--201115                    16       2.1      17          94        5         61      44   23   26   5    1.76

  204689--204730                    22       1.9      22          90        0         66      30   7    26   35   1.83

  224072--224115                    24       2.0      21          82        13        52      22   20   11   45   1.83

  234009--234063                    21       2.6      21          82        5         67      14   25   27   32   1.95

  236963--237005                    18       2.4      18          81        18        54      34   25   20   18   1.96

  260562--260605                    22       2.0      21          82        4         52      27   20   11   40   1.86

  291558--291601                    22       2.0      22          82        4         54      40   11   20   27   1.86

  419132--419157                    13       2.0      13          100       0         52      0    23   15   61   1.33

  419677--419719                    21       2.0      21          95        0         77      39   16   11   32   1.84

  419669--419719                    21       2.3      23          83        12        72      35   15   11   37   1.84

  440361--440388                    14       2.0      14          100       0         56      28   28   21   21   1.99
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!