123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_016123
    Parameters: 2 7 7 80 10 50 500
    Length:  219766

    Tables:   1   

    This is table  1  of  1  ( 17 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  4184--4208                        3        8.3      3           100       0         50      0    36   0    64   0.94

  28136--28225                      29       3.1      29          98        0         171     34   16   28   20   1.94

  49102--49175                      27       2.7      28          95        2         132     14   16   24   44   1.85

  61924--61948                      12       2.1      12          100       0         50      32   16   24   28   1.96

  69113--69161                      22       2.2      22          96        0         89      22   20   20   36   1.95

  71532--71618                      36       2.4      36          94        1         149     28   16   26   28   1.97

  71734--71771                      20       1.9      20          100       0         76      26   7    21   44   1.79

  88934--88960                      12       2.2      12          100       0         54      22   37   29   11   1.89

  116454--116483                    14       2.1      14          100       0         60      20   16   56   6    1.62

  118972--119010                    19       2.1      19          100       0         78      33   10   20   35   1.86

  119152--119262                    39       2.8      39          100       0         222     40   8    13   37   1.74

  138225--138263                    17       2.3      17          95        0         69      35   23   0    41   1.55

  144505--144546                    18       2.4      18          84        11        52      28   33   14   23   1.94

  147075--147104                    15       2.0      15          100       0         60      40   20   20   20   1.92

  186192--186259                    34       2.0      34          88        0         100     26   29   26   17   1.98

  191591--191622                    15       2.1      15          94        0         55      0    28   3    68   1.04

  205165--205221                    21       2.7      21          100       0         114     54   19   10   15   1.70
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!