123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_022933
    Parameters: 2 7 7 80 10 50 500
    Length:  86451

    Tables:   1   

    This is table  1  of  1  ( 8 repeats found )

    Click on indices to view alignment

Table Explanation

  -------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                          Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                   Size     Number   Size        Matches   Indels                                (0-2)

  7884--7962                       30       2.7      29          77        11        88      77   2    1    18   0.96

  7905--7975                       20       3.3      21          84        9         90      81   2    0    15   0.80

  7906--7975                       13       5.2      13          75        13        54      82   2    0    14   0.77

  7909--7975                       26       2.5      25          77        20        73      82   2    0    14   0.79

  32481--32512                     11       2.9      11          90        0         55      40   0    0    59   0.97

  48063--48095                     16       2.1      16          88        11        50      36   3    3    57   1.29

  53541--53599                     4        14.8     4           100       0         118     76   0    0    23   0.79

  78271--78305                     18       1.9      18          88        0         52      28   14   17   40   1.88
  -------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!