123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_029809
    Parameters: 2 7 7 80 10 50 500
    Length:  365190

    Tables:   1   

    This is table  1  of  1  ( 16 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  88120--88157                      18       2.1      19          85        5         51      21   18   31   28   1.97

  120638--120670                    11       3.1      11          91        4         50      33   0    15   51   1.43

  121504--121556                    25       2.1      25          100       0         106     18   15   18   47   1.83

  121639--121670                    16       2.0      16          100       0         64      31   37   6    25   1.81

  130985--131015                    14       2.2      14          94        0         53      48   12   25   12   1.77

  142396--142474                    39       2.0      39          97        0         149     31   16   30   21   1.95

  148095--148128                    18       1.9      18          88        5         52      29   5    41   23   1.78

  182188--182233                    16       2.8      17          83        6         58      52   19   15   13   1.75

  219884--219912                    15       1.9      15          100       0         58      6    20   0    72   1.07

  220048--220090                    21       2.0      21          95        0         77      20   23   9    46   1.79

  281984--282030                    2        24.0     2           78        4         51      48   2    6    42   1.40

  282004--282034                    16       1.9      16          93        0         53      51   0    12   35   1.40

  328397--328430                    14       2.4      14          90        5         50      47   11   11   29   1.76

  342313--342355                    18       2.4      18          80        0         50      37   23   20   18   1.94

  358207--358246                    20       2.0      20          90        0         62      57   0    17   25   1.40

  364768--364817                    12       4.2      12          92        0         82      32   40   12   16   1.84
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!