123.fas.2.7.7.80.10.50.500.1.html
Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.
Sequence: NC_029855
Parameters: 2 7 7 80 10 50 500
Length: 415602
Tables: 1
This is table 1 of 1 ( 9 repeats found )
Click on indices to view alignment
Table Explanation
--------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Indices Period Copy Consensus Percent Percent Score A C G T Entropy
Size Number Size Matches Indels (0-2)
12034--12112 39 2.0 39 97 0 149 21 27 18 31 1.97
34090--34133 21 2.0 21 82 13 52 31 29 6 31 1.84
145807--145928 61 2.0 61 100 0 244 24 29 26 19 1.99
195007--195047 21 2.0 21 85 9 57 17 43 12 26 1.84
198980--199022 18 2.4 18 84 7 61 55 0 0 44 0.99
229103--229127 12 2.1 12 100 0 50 44 16 24 16 1.86
286672--286707 19 1.9 19 88 5 56 13 27 27 30 1.94
368895--368937 18 2.4 18 81 18 54 34 25 20 18 1.96
415249--415275 14 1.9 14 100 0 54 37 14 11 37 1.82
--------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Tables: 1
The End!