123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_038052
    Parameters: 2 7 7 80 10 50 500
    Length:  594390

    Tables:   1   

    This is table  1  of  1  ( 10 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  102056--102091                    18       1.9      19          88        5         56      33   19   16   30   1.94

  120626--120668                    2        22.0     2           92        4         70      46   0    0    53   1.00

  174901--174946                    23       2.0      23          91        8         76      13   26   13   47   1.78

  245692--245764                    30       2.5      30          97        2         139     31   20   36   10   1.87

  292747--292784                    20       1.9      20          100       0         76      28   26   39   5    1.78

  293539--293563                    10       2.5      10          100       0         50      20   0    12   68   1.21

  293775--293814                    20       2.0      20          95        0         71      30   27   37   5    1.78

  303099--303257                    5        31.8     5           81        12        193     43   0    16   40   1.48

  303099--303257                    25       6.4      25          97        1         293     43   0    16   40   1.48

  558306--558355                    21       2.4      21          93        0         82      36   4    0    60   1.16
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!