123.fas.2.7.7.80.10.50.500.1.html
Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.
Sequence: NC_053642
Parameters: 2 7 7 80 10 50 500
Length: 492062
Tables: 1
This is table 1 of 1 ( 10 repeats found )
Click on indices to view alignment
Table Explanation
--------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Indices Period Copy Consensus Percent Percent Score A C G T Entropy
Size Number Size Matches Indels (0-2)
33398--33444 24 2.0 24 91 0 76 27 21 25 25 1.99
63813--63850 20 1.9 20 89 10 60 23 10 34 31 1.89
147529--147590 21 2.9 21 74 9 52 38 19 40 1 1.61
248301--248338 20 1.9 20 89 10 60 31 34 10 23 1.89
327069--327103 18 2.0 17 88 5 52 34 17 8 40 1.80
330215--330247 14 2.4 14 90 5 50 27 36 15 21 1.93
331989--332081 30 3.1 30 100 0 186 30 9 26 33 1.89
383642--383672 14 2.2 14 94 0 53 29 16 25 29 1.96
418588--418676 44 2.0 44 95 0 160 21 28 19 31 1.97
432921--433017 34 2.8 34 76 4 88 22 22 27 26 1.99
--------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Tables: 1
The End!