123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_054354
    Parameters: 2 7 7 80 10 50 500
    Length:  341829

    Tables:   1   

    This is table  1  of  1  ( 15 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  7084--7131                        24       2.1      22          88        7         69      58   8    6    27   1.51

  7617--7641                        13       1.9      13          100       0         50      80   8    4    8    1.03

  14013--14071                      18       3.3      18          100       0         118     16   33   10   38   1.83

  68876--69175                      150      2.0      150         100       0         600     34   17   22   26   1.96

  69547--69588                      21       2.0      21          95        0         75      57   9    7    26   1.56

  69946--69978                      14       2.4      14          95        5         59      57   0    0    42   0.98

  69946--69987                      16       2.7      16          92        3         68      54   0    2    42   1.13

  121044--121086                    18       2.4      18          81        18        54      18   20   25   34   1.96

  123033--123333                    150      2.0      150         100       0         602     43   21   15   19   1.88

  221391--221420                    15       2.0      15          93        0         51      20   30   26   23   1.98

  225204--225246                    18       2.4      18          81        18        54      34   25   20   18   1.96

  276303--276344                    16       2.7      16          92        3         68      42   2    0    54   1.13

  276312--276344                    14       2.4      14          95        5         59      42   0    0    57   0.98

  276702--276743                    21       2.0      21          95        0         75      26   7    9    57   1.56

  286282--286581                    150      2.0      150         100       0         600     17   24   18   39   1.92
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!