123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_058644
    Parameters: 2 7 7 80 10 50 500
    Length:  312598

    Tables:   1   

    This is table  1  of  1  ( 17 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ----- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T     Entropy
                                    Size     Number   Size        Matches   Indels                                 (0-2)

  15549--15594                      24       1.9      24          86        0         65      23   19   30   26    1.98

  17841--17867                      1        27.0     1           100       0         54      0    0    0    100   0.00

  31306--31359                      27       2.0      27          100       0         108     33   3    33   29    1.75

  47793--47844                      27       1.9      27          92        0         86      36   7    21   34    1.82

  107546--107589                    20       2.1      21          91        4         72      52   4    34   9     1.54

  112241--112319                    39       2.0      39          95        0         140     22   27   17   31    1.97

  116224--116322                    21       5.0      20          76        13        89      51   13   24   11    1.73

  116238--116322                    21       4.2      20          79        8         109     51   12   24   10    1.71

  116394--116424                    16       1.9      16          100       0         62      29   19   12   38    1.89

  156882--156924                    18       2.4      18          81        18        54      18   20   25   34    1.96

  158536--158579                    21       2.1      21          95        0         79      25   22   13   38    1.91

  160156--160205                    25       2.0      25          100       0         100     36   24   16   24    1.94

  188179--188208                    12       2.5      12          94        0         51      16   30   10   43    1.81

  206836--206875                    16       2.6      16          88        4         55      5    30   27   37    1.78

  231137--231179                    18       2.4      18          81        18        54      18   20   25   34    1.96

  232791--232834                    21       2.1      21          95        0         79      25   22   13   38    1.91

  234411--234460                    25       2.0      25          100       0         100     36   24   16   24    1.94
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ----- ---------

    Tables:   1   

The End!