123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_067879
    Parameters: 2 7 7 80 10 50 500
    Length:  304467

    Tables:   1   

    This is table  1  of  1  ( 17 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  28026--28071                      22       2.3      20          82        17        60      47   4    13   34   1.62

  44604--44802                      96       2.1      96          91        0         317     28   19   12   39   1.87

  65714--65759                      24       1.9      24          86        0         65      23   19   30   26   1.98

  83020--83067                      16       3.2      16          67        27        50      31   16   27   25   1.97

  92758--92791                      18       1.9      17          88        5         50      35   29   20   14   1.93

  143620--143669                    25       2.0      25          96        0         91      24   16   26   34   1.95

  145220--145263                    21       2.1      21          95        0         79      38   13   22   25   1.91

  146874--146916                    18       2.4      18          81        18        54      34   25   20   18   1.96

  174876--174915                    16       2.6      16          88        4         55      5    30   27   37   1.78

  188278--188356                    39       2.0      39          95        0         140     31   17   27   22   1.97

  192971--193006                    12       3.0      12          83        0         54      36   16   27   19   1.93

  259561--259612                    27       1.9      27          92        0         86      36   7    21   34   1.82

  272992--273034                    18       2.4      18          81        18        54      18   20   25   34   1.96

  274645--274688                    21       2.1      21          95        0         79      25   22   13   38   1.91

  276239--276288                    25       2.0      25          96        0         91      34   26   16   24   1.95

  285498--285560                    29       2.1      30          85        8         85      58   4    11   25   1.51

  291466--291554                    39       2.3      39          100       0         178     23   39   5    31   1.78
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!