123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_068745
    Parameters: 2 7 7 80 10 50 500
    Length:  324124

    Tables:   1   

    This is table  1  of  1  ( 12 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  28835--28875                      15       2.8      15          81        3         57      75   0    2    21   0.92

  29531--29609                      39       2.0      39          95        4         142     20   30   17   31   1.96

  40254--40284                      14       2.2      14          94        0         53      12   25   16   45   1.83

  49959--49998                      20       2.0      20          100       0         80      25   15   20   40   1.90

  54583--54657                      21       3.2      24          73        19        77      57   8    24   10   1.59

  55028--55052                      12       2.1      12          100       0         50      32   24   0    44   1.54

  106943--106974                    12       2.7      12          90        0         55      25   43   15   15   1.86

  153798--153831                    14       2.4      14          90        5         50      47   11   11   29   1.76

  167693--167735                    18       2.4      18          80        0         50      37   23   20   18   1.94

  263896--263990                    39       2.5      39          94        1         165     15   38   26   18   1.91

  285008--285050                    21       2.0      21          95        0         77      46   9    23   20   1.79

  285186--285214                    15       1.9      15          100       0         58      72   0    20   6    1.07
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!