123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_069588
    Parameters: 2 7 7 80 10 50 500
    Length:  519026

    Tables:   1   

    This is table  1  of  1  ( 15 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  24009--24110                      30       3.4      30          78        2         123     25   15   42   16   1.88

  34772--34849                      34       2.3      34          77        0         84      29   23   11   35   1.90

  78640--78741                      42       2.4      44          88        3         145     31   16   30   21   1.96

  81064--81123                      31       1.9      31          83        6         77      43   5    33   18   1.72

  124378--124402                    13       1.9      13          100       0         50      76   8    16   0    1.02

  175516--175588                    22       3.3      22          82        0         83      36   9    34   19   1.84

  217077--217135                    22       2.7      22          72        0         64      22   35   18   23   1.96

  244897--244934                    19       2.0      19          94        0         67      34   31   7    26   1.85

  282176--282218                    19       2.3      19          80        8         52      34   23   23   18   1.96

  299913--299969                    30       1.9      30          92        0         96      19   28   24   28   1.98

  317076--317101                    7        3.7      7           100       0         52      0    23   61   15   1.33

  403880--403952                    22       3.3      22          82        0         83      36   9    34   19   1.84

  416958--417016                    31       1.9      31          86        10        86      10   28   25   35   1.89

  416958--417016                    30       1.9      30          86        10        84      10   28   25   35   1.89

  490290--490392                    52       2.0      52          98        0         197     37   22   25   14   1.92
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!