123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_072135
    Parameters: 2 7 7 80 10 50 500
    Length:  345604

    Tables:   1   

    This is table  1  of  1  ( 19 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  1--192                            36       5.4      36          98        0         368     28   27   10   32   1.91

  5606--5717                        57       2.0      56          89        6         176     33   8    19   37   1.83

  16084--16152                      32       2.2      32          82        7         90      36   10   36   17   1.84

  44341--44401                      22       2.8      22          100       0         122     22   14   18   44   1.86

  57271--57486                      36       6.0      36          100       0         432     33   11   27   27   1.91

  59380--59481                      30       3.4      30          64        5         89      16   16   46   20   1.85

  97689--97720                      16       2.0      16          100       0         64      31   6    18   43   1.75

  135018--135071                    27       2.0      27          100       0         108     14   22   11   51   1.73

  137016--137072                    27       2.1      27          100       0         114     33   28   10   28   1.90

  151218--151267                    25       2.0      25          100       0         100     44   8    32   16   1.76

  189603--189627                    12       2.1      12          100       0         50      36   16   16   32   1.90

  217456--217485                    15       2.0      15          100       0         60      6    40   13   40   1.71

  263649--263713                    19       3.3      19          70        8         58      43   6    0    50   1.27

  270907--270942                    19       1.9      19          88        5         56      13   27   27   30   1.94

  283465--283521                    28       2.0      28          100       0         114     31   28   31   8    1.87

  315118--315168                    25       2.0      25          100       0         102     31   11   33   23   1.91

  323011--323035                    5        5.0      5           100       0         50      40   20   0    40   1.52

  323040--323068                    9        3.0      10          90        10        51      20   10   27   41   1.85

  345510--345604                    36       2.6      36          100       0         190     26   27   11   34   1.91
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!