123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_072730
    Parameters: 2 7 7 80 10 50 500
    Length:  229534

    Tables:   1   

    This is table  1  of  1  ( 14 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  783--823                          20       2.0      20          86        9         57      21   21   2    53   1.57

  48324--48365                      19       2.2      19          91        0         66      21   14   11   52   1.73

  68918--68957                      16       2.6      16          88        4         55      5    30   27   37   1.78

  76406--76480                      38       2.0      38          97        0         141     28   17   28   26   1.98

  79465--79537                      29       2.5      29          95        0         128     47   8    26   17   1.75

  98325--98418                      34       2.8      34          91        0         143     40   28   18   12   1.87

  101833--101943                    55       2.0      55          100       0         222     36   12   28   21   1.90

  103729--103762                    18       2.0      17          88        11        52      17   17   26   38   1.92

  105382--105425                    21       2.1      21          91        0         70      27   20   13   38   1.90

  161225--161267                    21       2.0      21          82        8         52      25   16   46   11   1.80

  195683--195761                    39       2.0      39          95        0         140     22   27   17   31   1.97

  203440--203529                    38       2.4      38          100       0         180     16   36   8    37   1.80

  203509--203673                    28       5.9      28          97        1         305     13   33   10   43   1.78

  204422--204466                    18       2.5      18          88        0         63      68   4    13   13   1.35
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!