123.fas.2.7.7.80.10.50.500.1.html
Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.
Sequence: NC_082039
Parameters: 2 7 7 80 10 50 500
Length: 302993
Tables: 1
This is table 1 of 1 ( 11 repeats found )
Click on indices to view alignment
Table Explanation
--------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Indices Period Copy Consensus Percent Percent Score A C G T Entropy
Size Number Size Matches Indels (0-2)
16412--16477 32 2.1 32 91 0 105 42 22 7 27 1.80
19445--19487 18 2.4 18 81 18 54 18 20 25 34 1.96
40339--40384 24 1.9 24 90 0 74 28 21 21 28 1.99
74454--74507 28 1.9 28 88 0 81 33 25 14 25 1.95
76290--76365 39 1.9 39 94 0 134 31 21 25 22 1.98
89482--89534 27 2.0 27 88 7 81 43 24 3 28 1.71
89494--89581 27 3.3 27 78 9 90 45 21 5 27 1.74
182896--182942 20 2.2 22 81 11 62 29 25 21 23 1.99
218324--218389 32 2.1 32 91 0 105 42 22 7 27 1.80
221357--221399 18 2.4 18 81 18 54 18 20 25 34 1.96
256654--256710 25 2.3 25 96 0 105 36 10 36 15 1.82
--------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Tables: 1
The End!