123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: OL804177
    Parameters: 2 7 7 80 10 50 500
    Length:  525348

    Tables:   1   

    This is table  1  of  1  ( 16 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  13191--13255                      21       3.0      21          79        20        73      32   24   21   21   1.98

  39925--39957                      16       2.1      16          88        11        50      12   30   21   36   1.90

  66409--66460                      26       2.0      26          100       0         104     15   30   7    46   1.74

  136966--136995                    14       2.1      15          93        6         53      6    33   23   36   1.81

  151446--151474                    14       2.0      15          93        6         51      6    34   20   37   1.80

  176839--176875                    17       2.2      17          95        0         65      18   18   48   13   1.80

  177922--177958                    14       2.6      14          91        4         56      5    32   24   37   1.78

  227306--227334                    13       2.1      14          93        6         51      6    34   20   37   1.80

  234904--234948                    17       2.6      17          78        0         54      42   20   6    31   1.77

  260812--260906                    42       2.3      42          100       0         190     40   22   8    29   1.83

  270942--270999                    18       3.2      17          80        9         62      46   20   15   17   1.84

  272201--272227                    14       1.9      14          100       0         54      37   14   22   25   1.93

  291582--291611                    15       2.0      15          100       0         60      46   13   13   26   1.80

  311747--311777                    6        5.3      6           92        7         55      32   16   0    51   1.44

  311747--311777                    11       2.7      12          90        10        55      32   16   0    51   1.44

  364956--364991                    16       2.2      16          95        0         63      13   19   50   16   1.79
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!