123.fas.2.7.7.80.10.50.500.1.html
Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.
Sequence: OM952136
Parameters: 2 7 7 80 10 50 500
Length: 116533
Tables: 1
This is table 1 of 1 ( 6 repeats found )
Click on indices to view alignment
Table Explanation
--------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Indices Period Copy Consensus Percent Percent Score A C G T Entropy
Size Number Size Matches Indels (0-2)
34354--34396 18 2.4 18 80 0 50 18 20 25 34 1.96
68517--68551 13 2.6 13 90 4 52 91 0 5 2 0.50
68515--68551 17 2.2 16 90 4 56 91 0 5 2 0.48
80278--80315 10 3.7 10 86 6 58 7 5 0 86 0.69
100163--100211 24 2.0 24 84 7 64 69 0 28 2 1.00
115910--115939 15 2.0 15 100 0 60 86 0 6 6 0.70
--------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
Tables: 1
The End!