123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: OQ621745
    Parameters: 2 7 7 80 10 50 500
    Length:  258555

    Tables:   1   

    This is table  1  of  1  ( 15 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  14397--14432                      18       2.0      18          88        0         54      22   25   25   27   2.00

  21447--21575                      34       3.8      34          97        0         240     25   7    40   26   1.82

  26020--26078                      26       2.3      26          100       0         118     32   8    32   27   1.87

  26301--26373                      36       2.0      36          100       0         146     28   19   21   30   1.98

  89253--89381                      34       3.8      34          97        0         240     25   7    40   26   1.82

  109689--109738                    25       2.0      25          100       0         100     24   16   24   36   1.94

  111316--111359                    21       2.1      21          95        0         79      38   13   22   25   1.91

  112971--113013                    18       2.4      18          81        18        54      34   25   20   18   1.96

  138061--138127                    21       2.9      23          72        20        68      11   25   7    55   1.62

  163311--163354                    20       2.1      21          91        4         72      52   4    34   9    1.54

  207551--207580                    12       2.5      12          94        0         51      43   10   30   16   1.81

  220967--220997                    7        4.4      7           100       0         62      87   0    0    12   0.55

  235576--235625                    25       2.0      25          100       0         100     24   16   24   36   1.94

  237203--237246                    21       2.1      21          95        0         79      38   13   22   25   1.91

  238858--238900                    18       2.4      18          81        18        54      34   25   20   18   1.96
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!