MK554796.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: MK554796.1 UNVERIFIED: Osmunda japonica chloroplast sequence
    Parameters: 2 7 7 80 10 50 500
    Length:  143220

    Tables:   1   

    This is table  1  of  1  ( 11 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  4749--4845                         51       1.9      51          85        4         133     30   18   14   36   1.91

  13490--13544                       21       2.6      21          79        0         65      32   12   14   40   1.84

  14599--14632                       17       2.0      17          94        0         59      50   11   32   5    1.63

  18800--18832                       14       2.4      14          94        0         57      54   0    9    36   1.32

  23787--23832                       16       2.9      15          83        6         56      28   8    23   39   1.84

  24215--24239                       12       2.1      12          100       0         50      28   24   24   24   2.00

  63327--63352                       2        13.0     2           100       0         52      50   0    0    50   1.00

  63368--63395                       14       2.0      14          100       0         56      50   0    21   28   1.49

  73749--73778                       15       2.0      15          100       0         60      33   13   26   26   1.93

  113601--113641                     9        4.6      9           93        0         64      34   17   0    48   1.47

  143023--143056                     17       2.0      17          88        0         50      11   23   11   52   1.70
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!