MN614128.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: MN614128.1 UNVERIFIED: Cistanche salsa chloroplast sequence
    Parameters: 2 7 7 80 10 50 500
    Length:  111710

    Tables:   1   

    This is table  1  of  1  ( 16 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  219--249                           14       2.2      14          94        0         53      38   16   0    45   1.47

  6255--6299                         20       2.2      20          92        0         72      64   0    15   20   1.29

  20271--20308                       2        19.0     2           88        0         58      55   0    0    44   0.99

  32255--32294                       16       2.6      16          88        7         57      50   5    2    42   1.37

  35773--35972                       9        25.0     8           73        26        144     53   0    46   0    1.00

  35773--35968                       30       6.7      30          84        14        277     53   0    46   0    1.00

  35773--35972                       39       5.5      36          81        17        218     53   0    46   0    1.00

  35773--35968                       57       3.4      57          91        7         308     53   0    46   0    1.00

  56726--56770                       15       3.0      15          100       0         90      26   6    13   53   1.64

  57931--58021                       9        10.4     9           82        7         98      29   1    29   39   1.64

  57930--58021                       27       3.5      27          82        4         109     29   1    29   40   1.64

  59236--59271                       18       2.0      18          100       0         72      33   5    16   44   1.71

  102937--102972                     18       2.0      18          100       0         72      44   16   5    33   1.71

  104187--104277                     9        10.4     9           82        7         98      39   29   1    29   1.64

  104181--104278                     27       3.7      27          82        4         112     40   27   1    30   1.63

  105438--105482                     15       3.0      15          100       0         90      53   13   6    26   1.64
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!