MN885669.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: MN885669.1 Pyrrosia sheareri chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  158165

    Tables:   1   

    This is table  1  of  1  ( 12 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  5426--5459                         13       2.6      13          85        0         50      67   8    2    20   1.31

  48314--48345                       16       2.0      16          100       0         64      31   31   12   25   1.92

  58261--58300                       9        4.4      9           93        0         71      27   10   30   32   1.89

  59726--59757                       9        3.6      9           100       0         64      31   31   12   25   1.92

  64400--64443                       20       2.1      20          83        8         52      65   4    4    25   1.30

  73996--74027                       16       2.0      16          100       0         64      31   6    12   50   1.65

  103997--104046                     24       2.1      24          88        0         73      44   14   16   26   1.85

  108950--108985                     18       2.0      18          88        0         54      27   16   38   16   1.90

  111836--111867                     2        16.0     2           93        0         55      46   0    3    50   1.17

  120099--120144                     23       2.0      23          100       0         92      21   30   13   34   1.91

  131706--131741                     18       2.0      18          88        0         54      16   38   16   27   1.90

  136645--136694                     24       2.1      24          88        0         73      26   16   14   44   1.85
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!