MW900176.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: MW900176.1 Schizonepeta tenuifolia chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  151260

    Tables:   1   

    This is table  1  of  1  ( 16 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  43890--43916                       13       2.1      13          100       0         54      14   14   0    70   1.17

  58106--58137                       16       2.0      16          93        0         55      25   15   18   40   1.90

  62695--62723                       14       2.1      14          100       0         58      72   0    0    27   0.85

  87482--87536                       24       2.5      22          85        8         67      14   23   12   49   1.78

  87504--87571                       21       3.2      21          77        8         75      11   22   10   55   1.65

  89879--89950                       18       4.2      18          91        5         114     34   5    25   34   1.79

  89879--89950                       9        8.3      9           71        9         60      34   5    25   34   1.79

  97662--97699                       18       2.1      18          100       0         76      26   5    5    63   1.37

  105648--105708                     31       2.0      31          93        0         104     40   21   9    27   1.85

  109556--109610                     27       2.1      26          83        10        67      78   5    16   0    0.93

  128226--128286                     31       2.0      31          93        0         104     27   9    21   40   1.85

  136235--136272                     18       2.1      18          100       0         76      63   5    5    26   1.37

  143984--144055                     18       4.2      18          91        5         114     34   25   5    34   1.79

  143984--144055                     9        8.3      9           71        9         60      34   25   5    34   1.79

  146381--146434                     21       2.6      21          82        11        74      59   11   20   9    1.59

  146363--146452                     21       4.1      22          75        8         67      53   11   23   12   1.70
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!