123.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_011154
    Parameters: 2 7 7 80 10 50 500
    Length:  117618

    Tables:   1   

    This is table  1  of  1  ( 18 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  19599--19628                      15       2.0      15          93        0         51      50   10   20   20   1.76

  21289--21330                      21       2.0      21          95        0         75      40   9    40   9    1.70

  32000--32064                      21       3.1      21          95        0         112     32   13   20   33   1.91

  42517--42545                      14       2.1      14          100       0         58      41   0    13   44   1.44

  44488--44528                      21       2.0      21          90        0         64      31   2    26   39   1.70

  54847--54882                      18       2.0      18          100       0         72      27   11   16   44   1.82

  74633--74667                      15       2.3      15          85        0         52      25   34   22   17   1.96

  92069--92101                      16       2.1      16          94        0         57      33   24   3    39   1.71

  93115--93151                      9        3.9      9           92        7         56      16   8    0    75   1.02

  96803--96834                      15       2.1      15          100       0         64      37   15   6    40   1.73

  98127--98189                      24       2.6      24          94        0         108     49   0    33   17   1.47

  98127--98180                      12       4.5      12          100       0         108     50   0    33   16   1.46

  99313--99391                      27       2.9      28          92        7         121     37   15   13   32   1.87

  99333--99405                      27       2.4      30          78        21        89      35   15   16   31   1.90

  99716--99764                      18       2.7      19          84        6         57      61   10   14   14   1.57

  99951--100108                     15       10.7     15          84        4         205     45   13   17   21   1.83

  99951--100108                     30       5.4      30          89        4         241     45   13   17   21   1.83

  111595--111634                    21       1.9      21          94        0         71      22   27   12   37   1.90
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!