NC_011954.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_011954.1 Ephedra equisetina chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  109518

    Tables:   1   

    This is table  1  of  1  ( 9 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  8646--8683                         19       2.0      20          89        5         60      55   7    7    28   1.57

  17578--17607                       11       2.7      11          94        0         51      63   0    6    30   1.20

  34738--34763                       4        6.5      4           100       0         52      23   26   0    50   1.50

  36022--36059                       19       2.0      19          100       0         76      26   21   10   42   1.85

  60256--60312                       28       2.0      28          100       0         114     47   14   21   17   1.82

  78274--78309                       10       3.6      10          85        14        56      52   0    11   36   1.37

  78277--78318                       20       2.1      20          90        0         66      52   2    11   33   1.51

  91843--91884                       20       2.1      20          90        0         66      33   11   2    52   1.51

  91852--91887                       10       3.6      10          85        14        56      36   11   0    52   1.37
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!