NC_020431.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_020431.1 Salvia miltiorrhiza chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  151328

    Tables:   1   

    This is table  1  of  1  ( 14 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  6129--6168                         19       2.0      20          95        4         73      57   5    5    32   1.42

  8165--8213                         19       2.5      19          75        15        55      69   0    2    28   1.00

  58232--58263                       16       2.0      16          93        0         55      25   21   15   37   1.93

  58531--58573                       17       2.6      16          81        3         50      51   9    2    37   1.47

  62318--62351                       17       2.0      17          94        0         59      29   26   11   32   1.92

  87478--87532                       24       2.5      22          85        8         67      14   23   12   49   1.78

  87500--87567                       21       3.2      21          77        8         75      11   22   10   55   1.65

  89884--89992                       18       6.1      18          93        0         155     31   8    26   33   1.86

  109828--109866                     20       2.0      20          85        10        53      56   23   0    20   1.42

  114741--114769                     14       2.1      14          100       0         58      48   6    17   27   1.72

  136301--136346                     23       2.0      22          83        4         56      60   6    6    26   1.46

  144032--144140                     18       6.1      18          93        0         155     33   26   8    31   1.86

  146475--146528                     21       2.6      21          82        11        74      59   11   20   9    1.59

  146457--146546                     21       4.1      22          75        8         67      53   11   23   12   1.70
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!