NC_034368.1.fas.2.7.7.80.10.50.500.1.html Tandem Repeats Finder Program written by: Gary Benson Program in Bioinformatics Boston University Version 4.09 Please cite: G. Benson, "Tandem repeats finder: a program to analyze DNA sequences" Nucleic Acid Research(1999) Vol. 27, No. 2, pp. 573-580. Sequence: NC_034368.1 Fritillaria thunbergii chloroplast, complete genome Parameters: 2 7 7 80 10 50 500 Length: 152155 Tables: 1 This is table 1 of 1 ( 24 repeats found ) Click on indices to view alignment Table Explanation ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- --------- Indices Period Copy Consensus Percent Percent Score A C G T Entropy Size Number Size Matches Indels (0-2) 3295--3322 14 2.0 14 100 0 56 42 7 21 28 1.79 7434--7480 23 2.0 23 100 0 94 21 25 10 42 1.85 7594--7627 17 2.0 17 94 0 59 50 5 0 44 1.26 27853--27912 26 2.3 26 77 11 68 48 1 1 48 1.21 27871--27910 13 3.1 13 89 10 64 50 0 0 50 1.00 30278--30314 13 2.8 13 95 0 65 54 10 0 35 1.36 30270--30309 22 1.9 20 90 10 62 52 12 0 35 1.39 30281--30320 13 3.1 13 92 0 62 55 7 2 35 1.42 44203--44248 23 2.0 23 83 8 58 56 6 0 36 1.25 44385--44419 17 2.1 17 89 10 54 48 0 0 51 1.00 45999--46024 13 2.0 13 100 0 52 46 15 0 38 1.46 54273--54305 15 2.1 16 88 5 50 21 0 6 72 1.05 56527--56587 24 2.4 24 75 8 59 42 6 1 49 1.38 77003--77051 24 2.0 24 88 0 71 26 32 14 26 1.94 79449--79485 18 2.1 18 89 0 56 21 2 10 64 1.37 86729--86776 21 2.3 21 96 0 87 12 33 8 45 1.72 89069--89149 24 3.4 24 94 0 144 32 8 23 35 1.85 110608--110652 18 2.5 18 96 0 81 42 8 13 35 1.75 110669--110719 22 2.3 23 79 3 59 33 3 3 58 1.35 123030--123059 15 2.0 15 93 0 51 43 10 0 46 1.37 125032--125062 15 2.1 15 93 0 53 38 6 6 48 1.55 144897--144977 24 3.4 24 94 0 144 35 23 8 32 1.85 Indices Period Copy Consensus Percent Percent Score A C G T Entropy Size Number Size Matches Indels (0-2) 147270--147317 21 2.2 22 92 7 89 45 8 33 12 1.72 147277--147331 21 2.5 21 88 8 74 43 10 29 16 1.82 ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- --------- Tables: 1 The End!