NC_035589.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_035589.1 Lilium lancifolium chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  152574

    Tables:   1   

    This is table  1  of  1  ( 21 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  1296--1322                         13       2.1      13          100       0         54      70   7    0    22   1.12

  13079--13104                       13       2.0      13          100       0         52      30   23   0    46   1.53

  28432--28482                       13       3.9      13          85        10        68      50   0    1    47   1.12

  30917--30950                       13       2.6      13          95        0         59      52   11   0    35   1.38

  30920--30961                       11       3.6      11          90        6         57      54   7    2    35   1.41

  46219--46244                       13       2.0      13          100       0         52      46   15   0    38   1.46

  52537--52567                       16       2.0      15          93        6         53      54   6    6    32   1.51

  54460--54492                       15       2.1      16          94        5         59      18   0    9    72   1.10

  65154--65196                       23       1.9      22          85        4         59      44   6    0    48   1.29

  65168--65204                       10       3.8      10          92        3         58      48   2    0    48   1.15

  78358--78414                       28       2.0      28          83        6         71      50   0    0    49   1.00

  79494--79565                       36       2.0      36          100       0         144     41   13   5    38   1.68

  89272--89328                       24       2.4      24          96        0         105     31   8    24   35   1.86

  97058--97083                       13       2.0      13          100       0         52      23   0    0    76   0.78

  97051--97111                       31       1.9      31          83        6         77      18   4    3    73   1.14

  110925--110975                     22       2.3      23          79        3         59      33   3    3    58   1.35

  123286--123315                     15       2.0      15          93        0         51      43   10   0    46   1.37

  125503--125527                     12       2.1      12          100       0         50      32   16   8    44   1.76

  137471--137531                     31       1.9      31          83        6         77      73   3    4    18   1.14

  137499--137524                     13       2.0      13          100       0         52      76   0    0    23   0.78

  145254--145310                     24       2.4      24          96        0         105     35   24   8    31   1.86
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!