NC_037215.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_037215.1 Fritillaria walujewii isolate CBX31-1 chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  151920

    Tables:   1   

    This is table  1  of  1  ( 22 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  3299--3326                         14       2.0      14          100       0         56      42   7    21   28   1.79

  7429--7475                         23       2.0      23          95        0         85      21   23   10   44   1.83

  7588--7621                         17       2.0      17          100       0         68      52   5    0    41   1.25

  27781--27856                       39       1.9      39          81        5         91      50   1    2    46   1.24

  27822--27881                       26       2.3      26          77        11        68      48   1    1    48   1.21

  27840--27879                       13       3.1      13          89        10        64      50   0    0    50   1.00

  30152--30198                       13       3.6      13          94        0         67      53   8    2    36   1.44

  30144--30183                       22       1.9      20          90        10        62      52   12   0    35   1.39

  44062--44107                       23       2.0      23          83        8         58      56   6    0    36   1.25

  44242--44283                       22       1.9      22          85        9         59      47   0    0    52   1.00

  45856--45881                       13       2.0      13          100       0         52      46   15   0    38   1.46

  53984--54013                       14       2.1      14          93        0         51      53   3    6    36   1.44

  54127--54159                       15       2.1      16          88        5         50      21   0    6    72   1.05

  56378--56438                       24       2.4      24          75        8         59      42   6    1    49   1.38

  75316--75351                       17       2.1      17          100       0         72      44   8    0    47   1.33

  76817--76865                       24       2.0      24          88        0         71      26   32   14   26   1.94

  77302--77345                       21       2.1      21          100       0         88      22   13   4    59   1.53

  79284--79320                       18       2.1      18          90        10        58      21   0    10   67   1.21

  88888--88968                       24       3.4      24          94        0         144     32   8    23   35   1.85

  110487--110537                     22       2.3      23          79        3         59      33   3    3    58   1.35

  122817--122846                     15       2.0      15          93        0         51      43   10   0    46   1.37

  144696--144776                     24       3.4      24          94        0         144     35   23   8    32   1.85
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!