NC_041671.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_041671.1 Rhodiola rosea voucher RROSE20180308 chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  151348

    Tables:   1   

    This is table  1  of  1  ( 16 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  7643--7675                         16       2.1      16          100       0         66      42   6    6    45   1.53

  9826--9866                         18       2.4      17          88        8         57      46   0    0    53   1.00

  30072--30117                       10       4.5      10          89        5         74      54   17   0    28   1.43

  31566--31603                       19       2.0      19          100       0         76      36   5    10   47   1.61

  32053--32099                       22       2.1      22          96        0         85      57   8    19   14   1.63

  36408--36453                       13       3.5      13          83        16        60      47   0    6    45   1.28

  36416--36474                       25       2.4      25          91        5         93      50   0    5    44   1.24

  46327--46352                       13       2.0      13          100       0         52      61   7    15   15   1.55

  87558--87623                       21       3.1      21          80        0         78      12   24   9    54   1.66

  89580--89609                       15       2.0      15          93        0         51      26   10   13   50   1.73

  90000--90050                       18       2.8      19          85        5         61      31   9    31   27   1.89

  98009--98037                       14       2.0      15          93        6         51      34   0    17   48   1.47

  108465--108525                     31       2.0      30          84        9         79      65   3    9    21   1.37

  136028--136056                     14       2.0      15          93        6         51      48   17   0    34   1.47

  144456--144485                     15       2.0      15          93        0         51      50   13   10   26   1.73

  146442--146507                     21       3.1      21          80        0         78      54   9    24   12   1.66
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!