NC_042211.1.fas.2.7.7.80.10.50.500.1.html
Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.
Sequence: NC_042211.1 Eriocaulon buergerianum chloroplast, complete genome
Parameters: 2 7 7 80 10 50 500
Length: 151434
Tables: 1
This is table 1 of 1 ( 20 repeats found )
Click on indices to view alignment
Table Explanation
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Indices Period Copy Consensus Percent Percent Score A C G T Entropy
Size Number Size Matches Indels (0-2)
5770--5813 13 3.2 13 87 12 61 47 0 0 52 1.00
13148--13173 12 2.2 12 100 0 52 34 15 7 42 1.75
15212--15261 2 27.0 2 76 15 54 44 0 0 56 0.99
15212--15261 14 3.7 14 79 15 61 44 0 0 56 0.99
15205--15260 16 3.4 16 75 15 53 42 0 0 57 0.99
27191--27248 16 3.7 16 71 24 52 27 5 10 56 1.54
48647--48671 5 5.0 5 100 0 50 20 40 0 40 1.52
55492--55534 21 2.0 23 81 9 54 34 9 16 39 1.80
56897--56925 14 2.1 14 100 0 58 58 13 0 27 1.36
56894--56937 14 2.9 17 83 16 53 56 9 0 34 1.31
57011--57062 20 2.6 20 85 11 63 55 0 11 32 1.36
58493--58531 13 3.0 13 82 14 53 58 10 0 30 1.31
58501--58531 16 1.9 16 100 0 62 61 6 0 32 1.21
58493--58525 10 3.4 10 91 4 50 60 9 0 30 1.27
65188--65214 14 1.9 14 100 0 54 59 11 0 29 1.32
77325--77353 12 2.4 12 100 0 58 31 0 0 68 0.89
89204--89328 24 5.2 24 91 1 189 32 10 26 30 1.90
116020--116054 13 2.6 13 95 4 61 34 5 0 60 1.21
136130--136176 15 2.9 17 78 9 53 68 2 12 17 1.31
143640--143764 24 5.2 24 91 1 189 30 26 10 32 1.90
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Tables: 1
The End!