NC_044183.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_044183.1 Pseudostellaria heterophylla chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  149765

    Tables:   1   

    This is table  1  of  1  ( 19 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  266--295                           15       2.0      15          100       0         60      46   0    13   40   1.43

  3679--3738                         30       2.0      30          100       0         120     36   3    10   50   1.53

  7898--7927                         15       2.0      15          93        0         51      10   6    0    83   0.81

  12094--12119                       11       2.4      11          100       0         52      42   0    7    50   1.31

  12331--12380                       19       2.7      18          79        11        57      74   2    4    20   1.08

  46350--46376                       11       2.5      11          100       0         54      29   14   0    55   1.40

  50306--50338                       16       2.1      16          100       0         66      24   12   18   45   1.83

  64890--64915                       12       2.2      12          100       0         52      69   0    15   15   1.20

  65589--65628                       21       1.9      21          94        0         71      32   22   10   35   1.87

  82968--83005                       20       1.9      20          88        0         58      44   7    18   28   1.78

  85598--85649                       21       2.5      21          96        0         95      7    23   15   53   1.67

  90309--90344                       16       2.2      16          100       0         72      16   33   8    41   1.78

  107591--107638                     22       2.0      24          84        11        64      70   6    18   4    1.25

  107605--107653                     25       2.0      25          83        0         62      73   8    16   2    1.16

  115459--115492                     14       2.4      14          90        0         59      55   0    0    44   0.99

  122637--122675                     20       1.9      21          89        5         62      10   12   5    71   1.28

  127514--127579                     32       2.1      32          88        0         96      25   10   21   42   1.85

  140962--140997                     16       2.2      16          100       0         72      41   8    33   16   1.78

  145657--145708                     21       2.5      21          96        0         95      53   15   23   7    1.67
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!