NC_044772.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_044772.1 Ephedra intermedia chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  109667

    Tables:   1   

    This is table  1  of  1  ( 11 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  8319--8357                         19       2.1      19          100       0         78      46   10   10   33   1.72

  17257--17286                       11       2.7      11          94        0         51      63   0    6    30   1.20

  32408--32435                       13       2.2      13          100       0         56      57   0    7    35   1.26

  44806--44834                       4        7.2      4           100       0         58      75   0    0    24   0.80

  47760--47788                       2        14.5     2           100       0         58      51   0    0    48   1.00

  77917--77952                       10       3.6      10          85        14        56      52   0    11   36   1.37

  77920--77961                       20       2.1      20          90        0         66      52   2    11   33   1.51

  88798--88960                       32       5.1      32          100       0         326     18   0    12   69   1.19

  88798--88981                       96       1.9      95          85        3         255     22   1    11   65   1.31

  91643--91684                       20       2.1      20          90        0         66      33   11   2    52   1.51

  91652--91687                       10       3.6      10          85        14        56      36   11   0    52   1.37
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!