NC_045286.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_045286.1 Artemisia scoparia chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  151060

    Tables:   1   

    This is table  1  of  1  ( 21 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  4999--5046                         15       3.3      15          85        2         71      52   12   10   25   1.71

  25035--25059                       12       2.1      12          100       0         50      60   8    8    24   1.52

  29893--29926                       17       2.0      17          100       0         68      47   0    35   17   1.48

  30097--30139                       21       2.0      22          90        4         70      48   25   6    18   1.73

  45801--45834                       17       2.0      17          100       0         68      70   0    17   11   1.16

  47634--47668                       15       2.4      14          90        9         52      60   20   0    20   1.37

  51703--51737                       15       2.3      15          90        0         52      34   14   14   37   1.86

  56188--56237                       24       2.1      24          96        0         91      36   14   18   32   1.90

  65299--65334                       17       2.1      17          100       0         72      58   5    19   16   1.58

  66745--66785                       21       2.0      21          95        0         73      31   24   9    34   1.88

  75633--75673                       20       2.0      20          100       0         82      19   0    24   56   1.42

  76446--76473                       14       2.0      14          100       0         56      42   7    7    42   1.59

  90063--90140                       18       4.3      18          95        0         129     29   10   26   33   1.89

  90063--90140                       9        8.7      9           68        0         57      29   10   26   33   1.89

  97719--97743                       10       2.5      10          100       0         50      40   8    0    52   1.31

  105730--105791                     32       1.9      32          96        0         115     41   20   8    29   1.81

  111710--111735                     11       2.4      11          100       0         52      53   11   7    26   1.63

  128104--128165                     32       1.9      32          96        0         115     29   8    20   41   1.81

  136152--136176                     10       2.5      10          100       0         50      52   0    8    40   1.31

  143755--143832                     18       4.3      18          95        0         129     33   26   10   29   1.89

  143768--143831                     9        7.1      9           70        0         56      34   28   7    29   1.85
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!