NC_045294.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_045294.1 Acorus tatarinowii chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  153296

    Tables:   1   

    This is table  1  of  1  ( 18 repeats found )

    Click on indices to view alignment

Table Explanation

  ----------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                             Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                      Size     Number   Size        Matches   Indels                                (0-2)

  6091--6118                          14       2.0      14          100       0         56      64   0    7    28   1.20

  31571--31610                        21       1.9      21          84        0         53      40   10   15   35   1.80

  36520--36554                        17       2.1      17          88        0         52      28   11   5    54   1.59

  36614--36641                        7        4.0      7           100       0         56      42   0    14   42   1.45

  46606--46635                        15       2.0      15          93        0         51      26   0    10   63   1.26

  70918--70947                        14       2.1      14          100       0         60      13   20   0    66   1.24

  78806--78851                        24       1.9      24          86        0         65      28   32   13   26   1.93

  88265--88350                        24       3.7      24          86        9         133     13   26   11   47   1.78

  88265--88354                        45       2.0      44          93        2         153     13   26   11   48   1.75

  89243--89290                        24       2.0      24          95        0         87      39   12   22   25   1.89

  89246--89297                        24       2.2      24          89        0         77      46   11   19   23   1.82

  107855--108097                      126      1.9      126         98        0         468     41   7    13   37   1.74

  110232--110267                      15       2.4      15          95        0         63      38   25   11   25   1.88

  127429--127467                      11       3.5      11          89        0         51      43   2    15   38   1.60

  128752--128994                      126      1.9      127         98        0         470     37   13   7    41   1.74

  147559--147606                      24       2.0      24          95        0         87      25   22   12   39   1.89

  148499--148584                      24       3.7      24          86        9         133     47   11   26   13   1.78

  148495--148584                      45       2.0      44          93        2         153     48   11   26   13   1.75
  ----------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!