NC_050063.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_050063.1 Achyranthes aspera chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  151486

    Tables:   1   

    This is table  1  of  1  ( 15 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  7920--7950                         14       2.2      14          100       0         62      9    6    0    83   0.79

  8207--8240                         15       2.3      15          90        10        52      58   5    0    35   1.22

  30179--30237                       29       2.0      29          100       0         118     44   20   10   25   1.83

  50693--50724                       16       2.0      16          100       0         64      31   25   18   25   1.98

  67324--67387                       2        36.5     2           71        25        56      51   0    0    48   1.00

  67321--67383                       20       3.0      21          83        6         83      52   0    0    47   1.00

  67384--67447                       32       2.0      32          100       0         128     68   6    6    18   1.32

  67393--67447                       16       3.2      19          61        28        50      69   7    5    18   1.32

  88117--88173                       24       2.4      24          96        0         105     15   22   12   49   1.78

  90507--90567                       18       3.4      18          100       0         122     27   9    26   36   1.88

  105985--106050                     32       2.1      32          91        0         105     40   22   10   25   1.86

  121637--121681                     16       2.9      16          83        3         56      20   22   6    51   1.70

  129370--129435                     32       2.1      32          91        0         105     25   10   22   40   1.86

  144853--144913                     18       3.4      18          100       0         122     36   26   9    27   1.88

  147247--147303                     24       2.4      24          96        0         105     49   12   22   15   1.78
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!