NC_050365.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_050365.1 Litsea glutinosa chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  152748

    Tables:   1   

    This is table  1  of  1  ( 21 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  3914--3938                         12       2.1      12          100       0         50      60   8    16   16   1.58

  4927--4960                         16       2.1      16          100       0         68      44   5    17   32   1.73

  28244--28275                       16       2.0      16          100       0         64      50   0    31   18   1.48

  31998--32027                       15       2.0      15          93        0         51      50   6    3    40   1.45

  33588--33624                       15       2.4      16          90        4         58      40   13   8    37   1.74

  34980--35012                       17       1.9      17          93        0         57      57   0    30   12   1.35

  48567--48598                       13       2.4      13          94        5         55      59   12   18   9    1.59

  71660--71704                       21       2.1      21          87        0         63      33   26   11   28   1.91

  80681--80719                       19       2.1      19          100       0         78      30   15   10   43   1.80

  92576--92664                       21       4.1      21          85        5         108     13   26   10   49   1.74

  94234--94277                       21       2.1      21          83        8         54      31   15   25   27   1.96

  95027--95083                       24       2.4      24          100       0         114     33   8    24   33   1.86

  102081--102131                     25       2.1      23          89        7         75      15   3    3    76   1.08

  112167--112206                     19       2.1      19          100       0         80      32   35   0    32   1.58

  113772--113809                     19       2.0      19          100       0         76      42   15   5    36   1.70

  113800--113852                     26       2.0      26          100       0         106     52   3    15   28   1.59

  129463--129503                     18       2.2      19          86        4         57      17   9    9    63   1.51

  132667--132702                     18       2.0      18          94        0         63      11   13   11   63   1.51

  134241--134280                     19       2.1      19          100       0         80      32   0    35   32   1.58

  144316--144366                     23       2.1      23          89        7         75      76   3    3    15   1.08

  151364--151420                     24       2.4      24          100       0         114     33   24   8    33   1.86
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!