NC_064406.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_064406.1 Coptis deltoidea isolate EMS301 chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  154538

    Tables:   1   

    This is table  1  of  1  ( 11 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  26832--26878                       21       2.2      21          92        0         76      34   8    23   34   1.85

  32200--32242                       17       2.6      17          79        17        54      44   0    6    48   1.29

  58093--58126                       17       2.0      17          94        0         59      55   0    5    38   1.24

  66496--66532                       17       2.1      18          90        5         58      32   10   5    51   1.60

  83612--83651                       21       1.9      21          84        0         53      25   22   10   42   1.84

  91606--91666                       18       3.6      18          91        6         92      32   6    24   36   1.81

  109420--109458                     21       1.9      21          89        5         62      23   35   12   28   1.91

  121117--121160                     22       2.0      22          95        0         79      61   2    4    31   1.28

  127926--127954                     12       2.5      12          94        5         51      24   13   27   34   1.93

  130012--130050                     21       1.9      21          89        5         62      28   12   35   23   1.91

  147804--147864                     18       3.6      18          91        6         92      36   24   6    32   1.81
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!