NC_064958.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_064958.1 Urtica urens chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  147544

    Tables:   1   

    This is table  1  of  1  ( 12 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  4194--4221                         13       2.2      13          100       0         56      64   21   0    14   1.29

  7005--7041                         16       2.3      16          86        13        58      21   5    0    72   1.04

  26260--26290                       15       2.1      15          100       0         62      19   0    12   67   1.22

  45319--45348                       16       1.9      15          93        6         51      60   0    0    40   0.97

  75967--76037                       35       2.0      35          97        0         133     21   7    23   47   1.75

  83951--84012                       21       2.7      23          73        19        67      12   24   9    53   1.69

  86381--86419                       18       2.2      18          100       0         78      33   5    25   35   1.78

  86381--86428                       9        5.3      9           79        0         51      33   8    25   33   1.86

  86388--86427                       18       2.2      18          90        0         62      35   10   27   27   1.89

  120882--120941                     18       3.5      17          82        17        63      6    11   5    76   1.13

  140214--140252                     18       2.2      18          100       0         78      35   25   5    33   1.78

  142621--142682                     21       2.7      23          73        19        67      53   9    24   12   1.69
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!