NC_066401.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_066401.1 Cyathula officinalis chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  151518

    Tables:   1   

    This is table  1  of  1  ( 10 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  190--229                           17       2.4      17          82        0         53      40   12   2    45   1.56

  7946--7979                         15       2.3      15          90        10        52      58   5    0    35   1.22

  31107--31153                       25       1.9      24          91        4         76      36   14   0    48   1.44

  36300--36346                       14       3.1      15          80        19        53      36   12   4    46   1.62

  36320--36346                       14       1.9      14          100       0         54      37   7    7    48   1.59

  46476--46508                       17       1.9      17          88        11        50      84   0    9    6    0.76

  90234--90276                       18       2.4      18          100       0         86      27   9    25   37   1.87

  105724--105789                     32       2.1      32          91        0         105     40   22   10   25   1.86

  129345--129410                     32       2.1      32          91        0         105     25   10   22   40   1.86

  144858--144900                     18       2.4      18          100       0         86      37   25   9    27   1.87
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!