NC_077558.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: NC_077558.1 Blumea balsamifera chloroplast, complete genome
    Parameters: 2 7 7 80 10 50 500
    Length:  151170

    Tables:   1   

    This is table  1  of  1  ( 20 repeats found )

    Click on indices to view alignment

Table Explanation

  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                            Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                     Size     Number   Size        Matches   Indels                                (0-2)

  12188--12242                       21       2.9      20          76        17        64      61   5    10   21   1.49

  42078--42117                       21       2.0      21          85        5         55      65   12   0    22   1.26

  53724--53755                       16       2.0      16          93        0         55      40   28   0    31   1.57

  57847--57885                       19       2.1      19          100       0         78      35   10   25   28   1.89

  58119--58166                       20       2.3      21          92        7         89      45   4    4    45   1.41

  58185--58209                       13       1.9      13          100       0         50      72   0    4    24   1.02

  59463--59498                       18       2.0      18          100       0         72      38   11   5    44   1.63

  66547--66587                       21       2.0      21          95        0         73      31   24   9    34   1.88

  79164--79188                       12       2.1      12          100       0         50      40   28   0    32   1.57

  89923--89976                       9        6.0      9           73        0         54      29   11   25   33   1.91

  89929--89991                       18       3.5      18          97        0         117     30   11   25   33   1.90

  97578--97635                       21       2.8      21          94        0         98      34   6    8    50   1.60

  105634--105695                     32       1.9      32          90        6         99      41   22   9    25   1.84

  110706--110737                     15       2.1      15          94        0         55      21   0    6    71   1.07

  115510--115545                     18       2.0      18          100       0         72      27   16   33   22   1.95

  122708--122747                     21       1.9      21          94        0         71      42   32   2    22   1.67

  128216--128277                     32       1.9      32          90        6         99      25   9    22   41   1.84

  136276--136333                     21       2.8      21          94        0         98      50   8    6    34   1.60

  143920--143982                     18       3.5      18          97        0         117     33   25   11   30   1.90

  143935--143988                     9        6.0      9           73        0         54      33   25   11   29   1.91
  ---------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!