OK545755.1.fas.2.7.7.80.10.50.500.1.html
Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.
Sequence: OK545755.1 Eupatorium fortunei chloroplast, complete genome
Parameters: 2 7 7 80 10 50 500
Length: 152401
Tables: 1
This is table 1 of 1 ( 22 repeats found )
Click on indices to view alignment
Table Explanation
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Indices Period Copy Consensus Percent Percent Score A C G T Entropy
Size Number Size Matches Indels (0-2)
12357--12382 12 2.2 12 100 0 52 57 7 15 19 1.62
29873--29914 22 2.0 22 86 13 61 54 2 14 28 1.52
34503--34528 13 2.0 13 100 0 52 38 7 23 30 1.83
47279--47333 18 3.3 18 76 23 75 41 12 14 30 1.83
47277--47339 31 2.0 31 100 0 126 44 12 12 30 1.80
51151--51185 15 2.3 15 90 0 52 34 14 14 37 1.86
58039--58068 15 2.0 15 93 0 51 56 6 10 26 1.57
58277--58314 20 1.9 20 89 10 60 47 5 7 39 1.55
58299--58326 12 2.3 12 100 0 56 57 0 7 35 1.26
65799--65830 15 2.1 15 100 0 64 53 6 0 40 1.26
66959--66999 21 2.0 21 90 0 64 31 21 9 36 1.86
70147--70176 16 1.9 15 93 6 51 53 6 3 36 1.44
90302--90346 18 2.5 18 100 0 90 28 11 26 33 1.91
92786--92832 23 2.0 23 100 0 94 53 12 4 29 1.58
105982--106043 32 1.9 32 93 0 106 41 22 8 27 1.82
107912--108213 151 2.0 151 100 0 604 29 11 18 40 1.85
111661--111700 21 1.9 21 100 0 80 20 2 35 42 1.65
115943--115980 19 2.0 19 94 0 67 31 5 23 39 1.77
122183--122223 20 2.0 20 95 0 73 63 0 7 29 1.21
129391--129452 32 1.9 32 93 0 106 27 8 22 41 1.82
142602--142648 23 2.0 23 100 0 94 29 4 12 53 1.58
145088--145132 18 2.5 18 100 0 90 33 26 11 28 1.91
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Tables: 1
The End!