OM617847.1.fas.2.7.7.80.10.50.500.1.html
Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.
Sequence: OM617847.1 Salvia splendens chloroplast, complete genome
Parameters: 2 7 7 80 10 50 500
Length: 150604
Tables: 1
This is table 1 of 1 ( 20 repeats found )
Click on indices to view alignment
Table Explanation
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Indices Period Copy Consensus Percent Percent Score A C G T Entropy
Size Number Size Matches Indels (0-2)
14001--14032 15 2.1 15 100 0 64 40 12 0 46 1.42
86964--87018 24 2.5 22 85 8 67 14 23 12 49 1.78
86986--87053 21 3.2 21 77 8 75 11 22 10 55 1.65
89382--89463 18 4.6 18 93 0 137 31 9 24 34 1.88
97167--97234 11 6.5 11 73 20 58 30 2 17 48 1.62
97172--97236 18 3.8 17 88 9 80 30 3 18 47 1.64
105167--105227 31 2.0 31 93 0 104 40 21 9 27 1.85
109079--109117 20 2.0 20 85 10 53 56 23 0 20 1.42
110814--110852 19 2.1 19 100 0 78 48 25 5 20 1.70
123721--123768 14 3.6 14 80 5 55 0 14 6 79 0.92
123714--123756 14 3.1 14 83 3 52 0 18 2 79 0.85
123714--123768 27 2.1 26 83 10 67 0 16 5 78 0.93
127559--127619 31 2.0 31 93 0 104 27 9 21 40 1.85
135545--135597 17 3.0 18 86 10 74 49 20 1 28 1.60
135550--135614 18 3.8 17 88 9 80 47 18 3 30 1.64
135569--135620 18 3.1 17 88 5 61 50 15 3 30 1.62
135601--135646 23 2.0 23 86 0 65 60 6 6 26 1.46
143323--143404 18 4.6 18 93 0 137 34 24 9 31 1.88
145751--145804 21 2.6 21 82 11 74 59 11 20 9 1.59
145733--145822 21 4.1 22 75 8 67 53 11 23 12 1.70
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Tables: 1
The End!