OM952137.1.fas.2.7.7.80.10.50.500.1.html

    Tandem Repeats Finder Program written by:

    Gary Benson
    Program in Bioinformatics
    Boston University
    Version 4.09

    Please cite:
    G. Benson,
    "Tandem repeats finder: a program to analyze DNA sequences"
    Nucleic Acid Research(1999)
    Vol. 27, No. 2, pp. 573-580.

    Sequence: OM952137.1 UNVERIFIED: Fagonia cretica voucher SUPG024 chloroplast sequence
    Parameters: 2 7 7 80 10 50 500
    Length:  101544

    Tables:   1   

    This is table  1  of  1  ( 15 repeats found )

    Click on indices to view alignment

Table Explanation

  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------
  Indices                           Period   Copy     Consensus   Percent   Percent   Score   A    C    G    T    Entropy
                                    Size     Number   Size        Matches   Indels                                (0-2)

  152--180                          12       2.4      12          100       0         58      62   20   0    17   1.33

  21489--21518                      11       2.7      11          89        0         51      90   0    0    10   0.47

  33749--33782                      2        17.0     2           93        0         59      52   0    0    47   1.00

  33914--33956                      14       3.1      14          90        3         61      90   0    9    0    0.45

  33914--33945                      1        32.0     1           93        0         55      96   0    3    0    0.20

  34663--34804                      71       2.0      71          100       0         284     23   23   28   23   2.00

  34900--34936                      18       2.1      18          94        0         65      89   8    0    2    0.58

  45878--45932                      22       2.4      21          82        11        56      80   1    3    14   0.94

  45898--45933                      9        4.0      9           92        0         63      86   0    2    11   0.68

  63189--63235                      23       2.0      23          91        0         76      12   21   8    57   1.62

  69257--69283                      9        3.0      9           100       0         54      33   0    0    66   0.92

  76686--76750                      32       2.0      32          96        0         121     41   20   9    29   1.83

  85044--85102                      29       2.0      29          100       0         118     33   10   13   42   1.78

  92713--92739                      9        3.0      9           100       0         54      66   0    0    33   0.92

  97729--97788                      18       3.3      18          88        0         93      33   25   10   31   1.89
  --------------------------------- -------- -------- ----------- --------- --------- ------- ---- ---- ---- ---- ---------

    Tables:   1   

The End!